Structure information

AT1 receptor

PROTEIN CLASS

Class A (Rhodopsin)

PDB CODE

4ZUD

SPECIES

Homo sapiens

RESOLUTION

2.800

PREFERRED CHAIN

A

REFERENCE

10.1074/JBC.M115.689000

PUBLICATION DATE

Oct. 7, 2015

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Ligand Interaction Browser

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Ligand Amino Acid Generic Number Segment Interaction Type
Ligand Amino Acid Generic Number Segment Interaction Type
OLMESARTAN Y35 1.39x39 TM1 polar (hydrogen bond)
OLMESARTAN Y35 1.39x39 TM1 Van der Waals
OLMESARTAN F77 2.53x53 TM2 Van der Waals
OLMESARTAN W84 2.60x60 TM2 aromatic (face-to-face)
OLMESARTAN W84 2.60x60 TM2 Van der Waals
OLMESARTAN Y87 2.63x63 TM2 Van der Waals
OLMESARTAN Y92 ECL1 hydrophobic
OLMESARTAN Y92 ECL1 Van der Waals
OLMESARTAN S105 3.29x29 TM3 Van der Waals
OLMESARTAN V108 3.32x32 TM3 Van der Waals
OLMESARTAN V108 3.32x32 TM3 hydrophobic
OLMESARTAN S109 3.33x33 TM3 polar (hydrogen bond)
OLMESARTAN S109 3.33x33 TM3 Van der Waals
OLMESARTAN R167 4.64x65 TM4 polar (charge-assisted hydrogen bond)
OLMESARTAN F182 45.52x52 ECL2 Van der Waals
OLMESARTAN I288 7.39x38 TM7 hydrophobic
OLMESARTAN I288 7.39x38 TM7 Van der Waals
OLMESARTAN Y292 7.43x42 TM7 Van der Waals
OLMESARTAN Y292 7.43x42 TM7 hydrophobic

Ligands

OLMESARTAN

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Residue Diagrams

S N G F I G V V F I I S Y L T P I M V F 1 L N L A L A D L C F L L T L P L W A V Y 2 C T L L F V S A Y L N F S V S A S A I K 3 A K V T C I I I W L L A G L A S L P A 4 Y S T L I I L F P F L F G L I N K T L G L 5 M A I V L F F F F S W I P H Q I F T F L 6 L P N L C N N F Y A I C I T I P M A T 7
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ICL1 M K L K ICL1ECL1 Y R W P F ECL1ICL2 P M K S R L R R ICL2ECL2 N V F F I E N T N I T V C A F H Y E S Q N S T ECL2ICL3 Y E I Q K N K ICL3ECL3 I I R ECL3N-term M I L N S S T E D G I K R I Q D D C P K A G R N-termC-term P P K A K S H S N L S T K M S T L S Y R P S D N V S S S T K K P A P C F E V E C-term H N Y I F V M I P T L Y S I I F V V G I F G N S L V V I V I Y F Y T V A S V F L L N L A L A D L C F L L T L P L W A V Y T A M E G N Y L C K I A S A S V S F N L Y A S V F L L T C L S I D R Y L A I V H T M L V A K V T C I I I W L L A G L A S L P A I I H R L P I G L G L T K N I L G F L F P F L I I L T S Y T L I W K A L K K A P R N D D I F K I I M A I V L F F F F S W I P H Q I F T F L D V L I Q L G D C R I A D I V D T A M P I T I C I A Y F N N C L N P L F Y G F L G K K F L Q I F K R Y L L K Y
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Residue Table


GPCRdb(A)
GPCRdb(A)
AT1 receptor
TM1
1x39 1.39x39 Y35
TM2
2x53 2.53x53 F77
2x60 2.60x60 W84
2x63 2.63x63 Y87
TM3
3x29 3.29x29 S105
3x32 3.32x32 V108
3x33 3.33x33 S109
TM4
4x65 4.64x65 R167
ECL2
45x52 45.52x52 F182
TM7
7x38 7.39x38 I288
7x42 7.43x42 Y292